Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
H2afb1Q9CQ70 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gm27321-201ENSMUST00000185021 205 ntBASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb1Q9CQ70 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm23935-201ENSMUST00000102303 57 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm24270-201ENSMUST00000102326 57 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm24245-201ENSMUST00000157318 57 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm22175-201ENSMUST00000175007 78 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Grk6-205ENSMUST00000224653 2976 ntBASIC11.13□□□□□ -0.63
H2afb1Q9CQ70 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms