Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Gm18041-201ENSMUST00000218210 618 ntBASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Grk6-205ENSMUST00000224653 2976 ntBASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim11Q99PQ2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.48■□□□□ 0.07
Trim11Q99PQ2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm27772-201ENSMUST00000184900 187 ntBASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim11Q99PQ2 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms