Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm12266-201ENSMUST00000120311 962 ntBASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm6407-201ENSMUST00000176468 549 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Mir6958-201ENSMUST00000184207 73 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Gm18730-201ENSMUST00000218038 343 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.98□□□□□ -0.01
Pcdh15Q99PJ1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Gm32999-201ENSMUST00000192693 562 ntBASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh15Q99PJ1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Gm12058-201ENSMUST00000118614 437 ntBASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh15Q99PJ1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms