Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm15460-201ENSMUST00000118147 391 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm15393-201ENSMUST00000120499 219 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm29741-201ENSMUST00000192667 421 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp1b1Q99LU0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp1b1Q99LU0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms