Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clp1Q99LI9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm16479-201ENSMUST00000121706 932 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Mir7070-201ENSMUST00000183657 86 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.26□□□□□ -0.13
Clp1Q99LI9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clp1Q99LI9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.25□□□□□ -0.13
Clp1Q99LI9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Gm6447-201ENSMUST00000118905 835 ntBASIC14.25□□□□□ -0.13
Clp1Q99LI9 Mir5132-201ENSMUST00000175166 71 ntBASIC14.25□□□□□ -0.13
Clp1Q99LI9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Gm6082-201ENSMUST00000215204 454 ntBASIC14.25□□□□□ -0.13
Clp1Q99LI9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.25□□□□□ -0.13
Clp1Q99LI9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Clp1Q99LI9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Gm24548-201ENSMUST00000158650 108 ntBASIC14.24□□□□□ -0.13
Clp1Q99LI9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Gm4768-201ENSMUST00000206199 686 ntBASIC14.24□□□□□ -0.13
Clp1Q99LI9 Gm19163-201ENSMUST00000223313 780 ntBASIC14.24□□□□□ -0.13
Clp1Q99LI9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clp1Q99LI9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms