Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RtcbQ99LF4 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.68■□□□□ 0.26
RtcbQ99LF4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RtcbQ99LF4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RtcbQ99LF4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RtcbQ99LF4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.67■□□□□ 0.26
RtcbQ99LF4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.67■□□□□ 0.26
RtcbQ99LF4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.67■□□□□ 0.26
RtcbQ99LF4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.67■□□□□ 0.26
RtcbQ99LF4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RtcbQ99LF4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.66■□□□□ 0.26
RtcbQ99LF4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RtcbQ99LF4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm12176-201ENSMUST00000121420 875 ntBASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.65■□□□□ 0.26
RtcbQ99LF4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RtcbQ99LF4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
RtcbQ99LF4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms