Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm10608-202ENSMUST00000213924 676 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Itm2b-204ENSMUST00000228637 783 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf1Q99LC2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Mir7070-201ENSMUST00000183657 86 ntBASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Snora73a-201ENSMUST00000082453 205 ntBASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf1Q99LC2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cstf1Q99LC2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms