Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Mir686-201ENSMUST00000102174 109 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm8584-201ENSMUST00000171982 758 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm18827-201ENSMUST00000188341 790 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm18056-201ENSMUST00000207670 568 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm18061-201ENSMUST00000208350 562 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm18063-201ENSMUST00000208529 568 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm18052-201ENSMUST00000208750 559 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Gm9368-201ENSMUST00000219348 831 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.6■□□□□ 0.09
Rfc4Q99J62 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfc4Q99J62 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm11793-201ENSMUST00000120433 981 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm12403-201ENSMUST00000121384 959 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm25927-201ENSMUST00000175058 117 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.59■□□□□ 0.09
Rfc4Q99J62 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfc4Q99J62 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfc4Q99J62 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Gm43758-201ENSMUST00000199500 367 ntBASIC15.58■□□□□ 0.08
Rfc4Q99J62 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.58■□□□□ 0.08
Rfc4Q99J62 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.58■□□□□ 0.08
Rfc4Q99J62 Gm10146-201ENSMUST00000072739 309 ntBASIC15.58■□□□□ 0.08
Rfc4Q99J62 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc4Q99J62 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms