Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.99■□□□□ 0.15
Col20a1Q923P0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Gm16177-201ENSMUST00000120728 718 ntBASIC15.99■□□□□ 0.15
Col20a1Q923P0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.99■□□□□ 0.15
Col20a1Q923P0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Gm4271-201ENSMUST00000174444 973 ntBASIC15.98■□□□□ 0.15
Col20a1Q923P0 Gm37424-201ENSMUST00000191727 561 ntBASIC15.98■□□□□ 0.15
Col20a1Q923P0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.98■□□□□ 0.15
Col20a1Q923P0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.98■□□□□ 0.15
Col20a1Q923P0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col20a1Q923P0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.97■□□□□ 0.15
Col20a1Q923P0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.97■□□□□ 0.15
Col20a1Q923P0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col20a1Q923P0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Gm14350-201ENSMUST00000116642 640 ntBASIC15.96■□□□□ 0.15
Col20a1Q923P0 Gm11618-201ENSMUST00000117946 267 ntBASIC15.96■□□□□ 0.15
Col20a1Q923P0 Gm8062-201ENSMUST00000139696 444 ntBASIC15.96■□□□□ 0.15
Col20a1Q923P0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Gm37922-201ENSMUST00000195596 455 ntBASIC15.96■□□□□ 0.15
Col20a1Q923P0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col20a1Q923P0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms