Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm15429-201ENSMUST00000151268 798 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm10275-202ENSMUST00000168697 495 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm29649-201ENSMUST00000185649 419 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm29127-201ENSMUST00000188304 517 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Gm10275-201ENSMUST00000092620 635 ntBASIC15.68■□□□□ 0.1
Smc1bQ920F6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc1bQ920F6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.67■□□□□ 0.1
Smc1bQ920F6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm12928-201ENSMUST00000117115 573 ntBASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.67■□□□□ 0.1
Smc1bQ920F6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.67■□□□□ 0.1
Smc1bQ920F6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc1bQ920F6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm18827-201ENSMUST00000188341 790 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms