Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm38223-201ENSMUST00000194484 695 ntBASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm18018-201ENSMUST00000198273 408 ntBASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm15371-201ENSMUST00000117057 784 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm42550-201ENSMUST00000201553 960 ntBASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha9Q91Y11 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms