Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9385-201ENSMUST00000117563 472 ntBASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Gm16026-204ENSMUST00000162652 683 ntBASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb3Q91XZ7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm44863-201ENSMUST00000207613 1422 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Gm44872-201ENSMUST00000207864 420 ntBASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb3Q91XZ7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms