Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm6912-201ENSMUST00000117218 544 ntBASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm24420-201ENSMUST00000176676 59 ntBASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb8Q91XZ2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb8Q91XZ2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb8Q91XZ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms