Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Snora73a-201ENSMUST00000082453 205 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Mir497b-201ENSMUST00000093601 125 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.41□□□□□ -0.26
Vsx1Q91V10 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vsx1Q91V10 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.4□□□□□ -0.26
Vsx1Q91V10 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Gm22323-201ENSMUST00000103832 109 ntBASIC13.4□□□□□ -0.26
Vsx1Q91V10 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vsx1Q91V10 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gm42550-201ENSMUST00000201553 960 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms