Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb11Q91UZ8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Gm24447-201ENSMUST00000083977 338 ntBASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb11Q91UZ8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb11Q91UZ8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb11Q91UZ8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb11Q91UZ8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb11Q91UZ8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gm5161-201ENSMUST00000075243 853 ntBASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms