Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Gm25144-201ENSMUST00000179561 110 ntBASIC14.06□□□□□ -0.16
Trim60Q8VI40 Gm25352-201ENSMUST00000179815 110 ntBASIC14.06□□□□□ -0.16
Trim60Q8VI40 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Mir874-201ENSMUST00000104769 76 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gm27622-201ENSMUST00000183779 60 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Gm5779-201ENSMUST00000218467 910 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Shd-206ENSMUST00000225145 998 ntBASIC14.05□□□□□ -0.16
Trim60Q8VI40 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim60Q8VI40 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.04□□□□□ -0.16
Trim60Q8VI40 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm12585-201ENSMUST00000117307 290 ntBASIC14.04□□□□□ -0.16
Trim60Q8VI40 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm10766-202ENSMUST00000194123 606 ntBASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm5312-201ENSMUST00000203728 547 ntBASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms