Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Gm11424-201ENSMUST00000121929 829 ntBASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 AC140375.2-201ENSMUST00000225283 584 ntBASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rprd1aQ8VDS4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Gm12490-201ENSMUST00000120255 560 ntBASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Mir7654-201ENSMUST00000185082 70 ntBASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rprd1aQ8VDS4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms