Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12403-201ENSMUST00000121384 959 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm38144-201ENSMUST00000192790 465 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpap2Q8VC34 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm12341-201ENSMUST00000119724 503 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.89□□□□□ -0.03
Rpap2Q8VC34 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpap2Q8VC34 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms