Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm27631-201ENSMUST00000184163 466 ntBASIC11.08□□□□□ -0.64
Nup35Q8R4R6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Mir497b-201ENSMUST00000093601 125 ntBASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.08□□□□□ -0.64
Nup35Q8R4R6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Mir8117-201ENSMUST00000184773 107 ntBASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.07□□□□□ -0.64
Nup35Q8R4R6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.07□□□□□ -0.64
Nup35Q8R4R6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup35Q8R4R6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms