Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm14057-201ENSMUST00000120631 482 ntBASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm24447-201ENSMUST00000083977 338 ntBASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf7Q8R0S1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Gm5161-201ENSMUST00000075243 853 ntBASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf7Q8R0S1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm12485-201ENSMUST00000119641 291 ntBASIC16.02■□□□□ 0.16
Atf7Q8R0S1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atf7Q8R0S1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.02■□□□□ 0.15
Atf7Q8R0S1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms