Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a1Q8K4Z5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a1Q8K4Z5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Gm24447-201ENSMUST00000083977 338 ntBASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a1Q8K4Z5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sf3a1Q8K4Z5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Gm5161-201ENSMUST00000075243 853 ntBASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sf3a1Q8K4Z5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Mir7654-201ENSMUST00000185082 70 ntBASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms