Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm6376-201ENSMUST00000209407 580 ntBASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Thap2-203ENSMUST00000218989 527 ntBASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Gm34391-201ENSMUST00000203706 907 ntBASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 AV026068-213ENSMUST00000223675 1171 ntBASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.35□□□□□ -0.43
Ebf4Q8K4J2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm5177-201ENSMUST00000183092 997 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm27459-201ENSMUST00000184860 107 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms