Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm5866-201ENSMUST00000177881 973 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm28760-201ENSMUST00000185995 736 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm42612-201ENSMUST00000197986 623 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm43170-201ENSMUST00000199827 612 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gm17795-201ENSMUST00000214505 757 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Syt7-205ENSMUST00000224135 1557 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gm7488-201ENSMUST00000117148 684 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gm2423-201ENSMUST00000074863 733 ntBASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfwd3Q8CIK8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Rubie-203ENSMUST00000227803 2430 ntBASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Gm44719-201ENSMUST00000206404 149 ntBASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Gm6218-201ENSMUST00000219812 628 ntBASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms