Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc38Q8CDN8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gm17837-201ENSMUST00000186435 985 ntBASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gm9063-201ENSMUST00000223299 582 ntBASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc38Q8CDN8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Gm18041-201ENSMUST00000218210 618 ntBASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc38Q8CDN8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc38Q8CDN8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms