Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm23984-201ENSMUST00000157139 203 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm37917-201ENSMUST00000194711 392 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm18018-201ENSMUST00000198273 408 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm15823-201ENSMUST00000064305 670 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.18□□□□□ -0.3
SynpoQ8CC35 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynpoQ8CC35 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gm12091-201ENSMUST00000146791 830 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gm21854-201ENSMUST00000179901 471 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.17□□□□□ -0.3
SynpoQ8CC35 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SynpoQ8CC35 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm12882-201ENSMUST00000121696 517 ntBASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Gm6180-201ENSMUST00000065243 498 ntBASIC13.16□□□□□ -0.3
SynpoQ8CC35 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynpoQ8CC35 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms