Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Trim9Q8C7M3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.97□□□□□ -0.01
Trim9Q8C7M3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim9Q8C7M3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms