Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm43133-201ENSMUST00000197472 463 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm6334-201ENSMUST00000207083 228 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm45865-201ENSMUST00000211815 945 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Snora73a-201ENSMUST00000082453 205 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm10268-201ENSMUST00000085340 555 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Mir433-201ENSMUST00000093564 124 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Gm12241-201ENSMUST00000118330 726 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Gm11793-201ENSMUST00000120433 981 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Olfr284-202ENSMUST00000206647 966 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Itm2b-204ENSMUST00000228637 783 ntBASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptcd1Q8C2E4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.68■□□□□ 0.26
Ptcd1Q8C2E4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms