Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim47Q8C0E3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim47Q8C0E3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim47Q8C0E3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim47Q8C0E3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim47Q8C0E3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim47Q8C0E3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim47Q8C0E3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim47Q8C0E3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gm15371-201ENSMUST00000117057 784 ntBASIC15.05■□□□□ -0
Trim47Q8C0E3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.05■□□□□ -0
Trim47Q8C0E3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.05■□□□□ -0
Trim47Q8C0E3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trim47Q8C0E3 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.05■□□□□ -0
Trim47Q8C0E3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.05■□□□□ -0
Trim47Q8C0E3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim47Q8C0E3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
Trim47Q8C0E3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm6754-201ENSMUST00000117124 913 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm18187-201ENSMUST00000196476 984 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm7287-201ENSMUST00000205267 602 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Gm5356-201ENSMUST00000093326 615 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Acot6-202ENSMUST00000222921 3622 ntBASIC15.04■□□□□ -0
Trim47Q8C0E3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim47Q8C0E3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim47Q8C0E3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gm14127-201ENSMUST00000117906 678 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms