Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Gm43094-201ENSMUST00000196549 921 ntBASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.02□□□□□ -0.17
Trub1Q8C0D0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Trub1Q8C0D0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm28760-201ENSMUST00000185995 736 ntBASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm17330-201ENSMUST00000221047 165 ntBASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trub1Q8C0D0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Gm14057-201ENSMUST00000120631 482 ntBASIC14□□□□□ -0.17
Trub1Q8C0D0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Gm24447-201ENSMUST00000083977 338 ntBASIC14□□□□□ -0.17
Trub1Q8C0D0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trub1Q8C0D0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trub1Q8C0D0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms