Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm29649-201ENSMUST00000185649 419 ntBASIC19.07■□□□□ 0.64
Usp47Q8BY87 Gm45784-201ENSMUST00000188360 142 ntBASIC19.07■□□□□ 0.64
Usp47Q8BY87 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp47Q8BY87 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 AC131068.2-201ENSMUST00000226175 1453 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm4782-201ENSMUST00000168705 2046 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm16177-201ENSMUST00000120728 718 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Mir1982-201ENSMUST00000157368 74 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm37922-201ENSMUST00000195596 455 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Gm9299-201ENSMUST00000206392 1140 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.06■□□□□ 0.64
Usp47Q8BY87 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp47Q8BY87 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC19.05■□□□□ 0.64
Usp47Q8BY87 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 AY702102-202ENSMUST00000194651 1173 ntBASIC19.05■□□□□ 0.64
Usp47Q8BY87 AC122305.4-201ENSMUST00000216159 1206 ntBASIC19.05■□□□□ 0.64
Usp47Q8BY87 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp47Q8BY87 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp47Q8BY87 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp47Q8BY87 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp47Q8BY87 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp47Q8BY87 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms