Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Gm15198-201ENSMUST00000117283 177 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Gm45880-201ENSMUST00000213041 853 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Gm26315-201ENSMUST00000083890 321 ntBASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rd3Q8BRE0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Gm17330-201ENSMUST00000221047 165 ntBASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rd3Q8BRE0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Gm23931-201ENSMUST00000103842 109 ntBASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Gm12203-201ENSMUST00000118235 598 ntBASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Gm12209-201ENSMUST00000120089 596 ntBASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rd3Q8BRE0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Mir1247-201ENSMUST00000116706 82 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm8213-201ENSMUST00000118191 441 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm10156-201ENSMUST00000122364 462 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm2445-201ENSMUST00000182798 989 ntBASIC14.36□□□□□ -0.11
Rd3Q8BRE0 Gm43179-201ENSMUST00000198797 275 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms