Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gm33320-201ENSMUST00000192232 530 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gm44855-201ENSMUST00000205725 362 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Grk6-205ENSMUST00000224653 2976 ntBASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm15460-201ENSMUST00000118147 391 ntBASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm24694-201ENSMUST00000180054 110 ntBASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm27663-201ENSMUST00000184839 110 ntBASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm7730-201ENSMUST00000212486 454 ntBASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4Q8BQZ5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm5866-201ENSMUST00000177881 973 ntBASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm9522-201ENSMUST00000182394 926 ntBASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4Q8BQZ5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms