Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm13036-201ENSMUST00000117799 748 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm11452-201ENSMUST00000122376 690 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Thap2-203ENSMUST00000218989 527 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Birc2-201ENSMUST00000054878 378 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.18□□□□□ -0.62
Smco3Q8BQM7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm7862-201ENSMUST00000121461 292 ntBASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm28033-201ENSMUST00000184224 96 ntBASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm34391-201ENSMUST00000203706 907 ntBASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Gm10060-201ENSMUST00000212002 111 ntBASIC11.17□□□□□ -0.62
Smco3Q8BQM7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.17□□□□□ -0.62
Smco3Q8BQM7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms