Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcal1Q8BJL0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gm38266-201ENSMUST00000194931 421 ntBASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gm43118-201ENSMUST00000199149 775 ntBASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcal1Q8BJL0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Gm22018-201ENSMUST00000104357 131 ntBASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcal1Q8BJL0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcal1Q8BJL0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms