Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22065-201ENSMUST00000103753 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22066-201ENSMUST00000103761 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24932-201ENSMUST00000103763 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24115-201ENSMUST00000103799 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22190-201ENSMUST00000103827 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22191-201ENSMUST00000103831 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24721-201ENSMUST00000103849 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm28018-201ENSMUST00000103869 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm26399-201ENSMUST00000103937 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25349-201ENSMUST00000177728 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm23616-201ENSMUST00000177797 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25871-201ENSMUST00000177816 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24752-201ENSMUST00000178240 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp2bQ8BJF9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm25925-201ENSMUST00000158314 306 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gm18041-201ENSMUST00000218210 618 ntBASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms