Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm11745-201ENSMUST00000121669 448 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm44719-201ENSMUST00000206404 149 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Gm45453-201ENSMUST00000211758 853 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim6Q8BGE7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gm18049-201ENSMUST00000208909 581 ntBASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Mir125a-201ENSMUST00000083545 68 ntBASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim6Q8BGE7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms