Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.43□□□□□ -0.26
Ubp1Q811S7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubp1Q811S7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.42□□□□□ -0.26
Ubp1Q811S7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.42□□□□□ -0.26
Ubp1Q811S7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.42□□□□□ -0.26
Ubp1Q811S7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ubp1Q811S7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.41□□□□□ -0.26
Ubp1Q811S7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.41□□□□□ -0.26
Ubp1Q811S7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ubp1Q811S7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms