Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Mir6956-201ENSMUST00000183598 62 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Gm5867-201ENSMUST00000063197 592 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc116Q80X53 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.31□□□□□ -0.28
Ccdc116Q80X53 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc116Q80X53 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms