Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp8Q80U87 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Usp8Q80U87 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp8Q80U87 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm15693-201ENSMUST00000120470 637 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm28630-201ENSMUST00000187806 498 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm5779-201ENSMUST00000218467 910 ntBASIC13.66□□□□□ -0.22
Usp8Q80U87 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp8Q80U87 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp8Q80U87 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.65□□□□□ -0.22
Usp8Q80U87 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Usp8Q80U87 Gm8410-201ENSMUST00000117225 605 ntBASIC13.65□□□□□ -0.22
Usp8Q80U87 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.65□□□□□ -0.22
Usp8Q80U87 Gm6415-201ENSMUST00000118488 348 ntBASIC13.65□□□□□ -0.22
Usp8Q80U87 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Usp8Q80U87 Gm37714-201ENSMUST00000194742 342 ntBASIC13.65□□□□□ -0.22
Usp8Q80U87 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp8Q80U87 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Usp8Q80U87 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Usp8Q80U87 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp8Q80U87 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Usp8Q80U87 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Usp8Q80U87 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm37935-201ENSMUST00000192012 982 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm29741-201ENSMUST00000192667 421 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm18041-201ENSMUST00000218210 618 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Usp8Q80U87 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm8396-201ENSMUST00000057361 823 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms