Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Gm37230-201ENSMUST00000194491 818 ntBASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38bQ80SY5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm13350-201ENSMUST00000120519 479 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm2495-201ENSMUST00000191160 466 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm33320-201ENSMUST00000192232 530 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38bQ80SY5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm7783-201ENSMUST00000204795 781 ntBASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38bQ80SY5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms