Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm8584-201ENSMUST00000171982 758 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm27486-201ENSMUST00000184923 80 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm9396-201ENSMUST00000076703 567 ntBASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh8Q7TSK3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh8Q7TSK3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh8Q7TSK3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh8Q7TSK3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh8Q7TSK3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh8Q7TSK3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms