Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.45□□□□□ -0.58
Smim12Q78RX3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm13385-201ENSMUST00000121089 220 ntBASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm13365-201ENSMUST00000121188 973 ntBASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.45□□□□□ -0.58
Smim12Q78RX3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim12Q78RX3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm8927-201ENSMUST00000181978 981 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm9229-201ENSMUST00000222777 126 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm3222-201ENSMUST00000071282 990 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.44□□□□□ -0.58
Smim12Q78RX3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim12Q78RX3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.43□□□□□ -0.58
Smim12Q78RX3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim12Q78RX3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms