Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm29608-201ENSMUST00000190444 463 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubfd1Q78JW9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm11425-201ENSMUST00000119608 498 ntBASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm9396-201ENSMUST00000076703 567 ntBASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubfd1Q78JW9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.21□□□□□ -0.29
Ubfd1Q78JW9 Mir1982-201ENSMUST00000157368 74 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms