Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.46□□□□□ -0.09
CtifQ6PEE2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.46□□□□□ -0.09
CtifQ6PEE2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CtifQ6PEE2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CtifQ6PEE2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.45□□□□□ -0.1
CtifQ6PEE2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Gm11764-201ENSMUST00000120221 623 ntBASIC14.45□□□□□ -0.1
CtifQ6PEE2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Gm29741-201ENSMUST00000192667 421 ntBASIC14.45□□□□□ -0.1
CtifQ6PEE2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.45□□□□□ -0.1
CtifQ6PEE2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Gm11452-201ENSMUST00000122376 690 ntBASIC14.44□□□□□ -0.1
CtifQ6PEE2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.44□□□□□ -0.1
CtifQ6PEE2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.44□□□□□ -0.1
CtifQ6PEE2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms