Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm8805-201ENSMUST00000117848 313 ntBASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm4986-201ENSMUST00000119731 549 ntBASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm11591-201ENSMUST00000120063 702 ntBASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm25668-201ENSMUST00000157700 129 ntBASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Gm7046-201ENSMUST00000221351 977 ntBASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm20482-202ENSMUST00000174729 825 ntBASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Snrnp40Q6PE01 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Snrnp40Q6PE01 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.9□□□□□ -0.51
Snrnp40Q6PE01 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Snrnp40Q6PE01 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Snrnp40Q6PE01 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Snrnp40Q6PE01 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm7809-201ENSMUST00000153199 742 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Mospd4-201ENSMUST00000180618 576 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm2383-201ENSMUST00000181461 807 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Mir7070-201ENSMUST00000183657 86 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms