Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim37Q6PCX9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim37Q6PCX9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim37Q6PCX9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim37Q6PCX9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim37Q6PCX9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Gm45880-201ENSMUST00000213041 853 ntBASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Gm17795-201ENSMUST00000214505 757 ntBASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim37Q6PCX9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Matn2-206ENSMUST00000228570 2798 ntBASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim37Q6PCX9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Gm38266-201ENSMUST00000194931 421 ntBASIC15.1■□□□□ 0.01
Trim37Q6PCX9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim37Q6PCX9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim37Q6PCX9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim37Q6PCX9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms