Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Gm25700-201ENSMUST00000177693 110 ntBASIC20.53■□□□□ 0.88
Slx4Q6P1D7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Gm27046-201ENSMUST00000182160 463 ntBASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slx4Q6P1D7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Gm25043-201ENSMUST00000158604 212 ntBASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Gm43378-201ENSMUST00000199336 582 ntBASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slx4Q6P1D7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slx4Q6P1D7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Slx4Q6P1D7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slx4Q6P1D7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Slx4Q6P1D7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm11930-201ENSMUST00000117788 190 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm17208-201ENSMUST00000168388 535 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm27023-201ENSMUST00000182372 285 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm45224-201ENSMUST00000208203 414 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm8908-201ENSMUST00000121633 1024 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slx4Q6P1D7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Gm7467-201ENSMUST00000185173 652 ntBASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Gm8385-201ENSMUST00000058999 643 ntBASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slx4Q6P1D7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Gm15547-201ENSMUST00000122152 333 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms