Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
AtmQ62388 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Mir698-201ENSMUST00000102164 109 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Gm23270-201ENSMUST00000104055 131 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.56□□□□□ -0.4
AtmQ62388 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Gm9211-201ENSMUST00000182882 975 ntBASIC12.56□□□□□ -0.4
AtmQ62388 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.56□□□□□ -0.4
AtmQ62388 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.56□□□□□ -0.4
AtmQ62388 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Gm13665-201ENSMUST00000120830 528 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Gm26185-201ENSMUST00000157692 266 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Gm19353-201ENSMUST00000184561 445 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
AtmQ62388 Gm11340-201ENSMUST00000119226 412 ntBASIC12.55□□□□□ -0.4
AtmQ62388 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.55□□□□□ -0.4
AtmQ62388 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.55□□□□□ -0.4
AtmQ62388 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.55□□□□□ -0.4
AtmQ62388 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Gm13611-201ENSMUST00000118269 318 ntBASIC12.55□□□□□ -0.4
AtmQ62388 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.55□□□□□ -0.4
AtmQ62388 Gm31256-201ENSMUST00000194705 506 ntBASIC12.55□□□□□ -0.4
AtmQ62388 Gm9555-201ENSMUST00000200908 583 ntBASIC12.55□□□□□ -0.4
AtmQ62388 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.55□□□□□ -0.4
AtmQ62388 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.55□□□□□ -0.4
AtmQ62388 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AtmQ62388 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AtmQ62388 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
AtmQ62388 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.54□□□□□ -0.4
AtmQ62388 Gm16397-201ENSMUST00000122201 494 ntBASIC12.54□□□□□ -0.4
AtmQ62388 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.54□□□□□ -0.4
AtmQ62388 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.54□□□□□ -0.4
AtmQ62388 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.54□□□□□ -0.4
AtmQ62388 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.54□□□□□ -0.4
AtmQ62388 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
AtmQ62388 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AtmQ62388 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
AtmQ62388 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
AtmQ62388 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Rmrp-201ENSMUST00000157463 271 ntBASIC12.54□□□□□ -0.4
AtmQ62388 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Gm5781-201ENSMUST00000219792 443 ntBASIC12.54□□□□□ -0.4
AtmQ62388 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.54□□□□□ -0.4
AtmQ62388 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
AtmQ62388 Daam2-202ENSMUST00000224595 1926 ntBASIC12.54□□□□□ -0.4
AtmQ62388 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
AtmQ62388 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
AtmQ62388 Gm16202-201ENSMUST00000117532 544 ntBASIC12.53□□□□□ -0.4
AtmQ62388 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
AtmQ62388 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms