Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm14109-201ENSMUST00000118814 309 ntBASIC12.45□□□□□ -0.42
VcanQ62059 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VcanQ62059 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.45□□□□□ -0.42
VcanQ62059 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.45□□□□□ -0.42
VcanQ62059 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.45□□□□□ -0.42
VcanQ62059 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.45□□□□□ -0.42
VcanQ62059 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
VcanQ62059 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Gm4768-201ENSMUST00000206199 686 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Gm45433-201ENSMUST00000209386 247 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.44□□□□□ -0.42
VcanQ62059 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.44□□□□□ -0.42
VcanQ62059 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Gm13600-201ENSMUST00000117949 744 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VcanQ62059 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VcanQ62059 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
VcanQ62059 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.44□□□□□ -0.42
VcanQ62059 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.44□□□□□ -0.42
VcanQ62059 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
VcanQ62059 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcanQ62059 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VcanQ62059 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Gm12899-201ENSMUST00000120565 551 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.43□□□□□ -0.42
VcanQ62059 Gm29741-201ENSMUST00000192667 421 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.43□□□□□ -0.42
VcanQ62059 Gm11930-201ENSMUST00000117788 190 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
VcanQ62059 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Matn2-206ENSMUST00000228570 2798 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.43□□□□□ -0.42
VcanQ62059 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VcanQ62059 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.43□□□□□ -0.42
VcanQ62059 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcanQ62059 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.43□□□□□ -0.42
VcanQ62059 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.43□□□□□ -0.42
VcanQ62059 Gm10076-201ENSMUST00000073238 384 ntBASIC12.43□□□□□ -0.42
VcanQ62059 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
VcanQ62059 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.42□□□□□ -0.42
VcanQ62059 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms