Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Mir1897-201ENSMUST00000122581 272 ntBASIC13.02□□□□□ -0.33
Runx1t1Q61909 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.02□□□□□ -0.33
Runx1t1Q61909 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Gm27622-201ENSMUST00000183779 60 ntBASIC13.02□□□□□ -0.33
Runx1t1Q61909 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Gm6916-202ENSMUST00000205523 195 ntBASIC13.02□□□□□ -0.33
Runx1t1Q61909 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Runx1t1Q61909 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm27533-201ENSMUST00000183800 152 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Shd-206ENSMUST00000225145 998 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.01□□□□□ -0.33
Runx1t1Q61909 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Runx1t1Q61909 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Runx1t1Q61909 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Runx1t1Q61909 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13□□□□□ -0.33
Runx1t1Q61909 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13□□□□□ -0.33
Runx1t1Q61909 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Runx1t1Q61909 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13□□□□□ -0.33
Runx1t1Q61909 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13□□□□□ -0.33
Runx1t1Q61909 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13□□□□□ -0.33
Runx1t1Q61909 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Runx1t1Q61909 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Runx1t1Q61909 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Runx1t1Q61909 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms